Books
A.S. Bommarius and B.R. Riebel, “Biocatalysis – Fundamentals and Applications”, Wiley-VCH, 2004, ISBN: 3-527303-448
Other Publications
AS Bommarius, “Amine dehydrogenases occur in nature”, Nature Catalysis News and Views, Nature Catalysis 2019, 2, 288-89 (doi.org/10.1038/s41929-019-0270-2)
Refereed Papers
2020
1. TT Kwok, JR Bright, SR Vora, NJ Chrisandina, MJ Realff, AS Bommarius*, “Solvent selection for Lignin Value Prior to Pulping”, ChemSusChem 2020, 13, 267-273 (doi.org/10.1002/cssc.201901518)
2019
2018
1. *CJ Wilson, AS Bommarius, JA Champion, YO Chernoff, DG Lynn, AK Paravastu, C Liang, M-C Hsieh, JM Heemstra*, “Biomolecular Assemblies: Moving from Observation to Predictive Design”, Chem. Rev. 2018, 118, 11519-11574 (10.1021/acs.chemrev.8b00038)
2. MD Patil, G Grogan, AS Bommarius, and H Yun*, “Oxidoreductase-catalyzed synthesis of chiral amines”, ACS Catalysis 2018, 8, 10985–11015 (DOI:10.1021/acscatal.8b02924)
3. JM Robbins, J Geng, BA Barry, G Gadda, AS Bommarius*, "Photo-Irradiation Generates an Ultra-Stable 8-fFAD Semiquinone Radical with Unusual Properties in Formate Oxidase" Biochemistry 2018, 57, 5818-5826 (doi.org/10.1021/acs.biochem.8b00571)
4. A.A. Caparco, A.S. Bommarius, J.A. Champion*, “Effect of Peptide Linker Length and Composition on Immobilization and Catalysis of Leucine Zipper-Enzyme Fusion Proteins”, AIChE J. 2018, 64, 2934-2946 (doi.org/10.1002/aic.16150)
5. MD Patil, G Grogan, AS Bommarius, and H Yun*, “Recent advances in transaminase-mediated biocatalysis for the enantioselective synthesis of chiral amines”, Catalysts 2018, 8, 254 (p. 1-25) (http://dx.doi.org/10.3390/catal8070254)
6. A. Sharma, S.H. Behrens, Y.O. Chernoff, A.S. Bommarius*, “Modulation of the formation of Aβ and Sup35NM amyloids by complex interplay of specific and non-specific ion effects”, J. Phys. Chem. B 2018, 122, 4972-4981 (DOI: 10.1021/acs.jpcb.7b12836)
7. H.B. Rose#, T. Greinert#, C. Held*, G. Sadowski, A.S. Bommarius*, “Mutual influence of furfural and furancarboxylic acids on their solubility in aqueous solutions: Experiments and PC-SAFT predictions”, J. Chem. Eng. Data 2018, 63, 1460-1470 (doi: 10.1021/acs.jced.7b01039)
8. M.A. McDonald, L. Bromig, M.A. Grover, R.W. Rousseau, A.S. Bommarius*, “Kinetic Model Discrimination of Penicillin G Acylase Thermal Deactivation by Non-Isothermal Continuous Activity Assay”, Chem. Eng. Sci., 2018, 187, 79-86 (doi.org/10/1016/j.ces.2018.04.046)
9. MF Paye, HB Rose, JM Robbins, DA Yunda, S Cho, AS Bommarius*, “A high throughput pH-based colorimetric assay: application focus on alpha/beta hydrolases”, Anal. Biochem. 2018, 549, 80-90 (doi.org/10.1016/j.ab.2018.03.009)
10. JM Oh, B Sreedhar, ME Donaldson, TC Frank, AK Schultz, AS Bommarius, Y Kawajiri*, “Transesterification of propylene glycol methyl ether by reactive simulated moving bed chromatography using homogeneous catalyst”, Adsorption 2018, 24, 309-324 (doi.org/10.1007/s10450-018-9941-6)
11. J.M. Robbins, G. Gadda*, and A.S. Bommarius*, “Mechanistic Studies of Formate Oxidase from Aspergillus oryzae: A Novel Member of the Glucose-Methanol-Choline Oxidoreductase Enzyme Superfamily that Oxidizes Carbon Acids”, Archives Biochem. Biophys. 2018, 643, 24-31 (doi: 10.1016/j.abb.2018.02.007)
12. A.F. Miller#*, J.T. Park#, K.F. Ferguson, W. Pitsawong, A.S. Bommarius*, “Informing Efforts to Develop Nitroreductase for Amine Production”, special issue "Flavoproteins”, ed. W. van Berkel;Molecules 2018, 23, 211 (doi: 10.3390/molecules23020211)
1986-2017
1. T.T. Kwok, C.O. Luettgen, M.J. Realff, and A.S. Bommarius*, “Lignin value prior to pulping (LVPP): An advanced pulping concept”, TAPPI J. 2017, 16(10), 553-5; doi:
2. J.M. Robbins, M.G. Souffrant, D. Hamelberg, G. Gadda*, A.S. Bommarius*, “Enzyme-Mediated Conversion of Flavin Adenine Dinucleotide (FAD) to 8-Formyl FAD in Formate Oxidase Results in a Modified Cofactor with Enhanced Catalytic Properties”, Biochemistry 2017, 56, 3800-3807; DOI: 10.1021/acs.biochem.7b00335.
3. L.C.P. Goncalves, S. Milker, D. Kracher, M.J. Fink, F. Rudroff*, R. Ludwig*, A.S. Bommarius, M.D. Mihovilovic*, "Mutagenesis-independent stabilization of class B flavin monooxygenases in operation",Adv. Synth. Catal. 2017, 359, 2121-2131 (doi: 10.1002/adsc.201700585)
4. TT Kwok, DN Fogg, MJ Realff, AS Bommarius*, “Direct Yellow 11: an Alternative Dye for Modified Simons' Staining”, Cellulose 2017, 24, 2367-2373 (DOI 10.1007/s10570-017-1269-y)
5. MA McDonald, AS Bommarius*, RW Rousseau, “Enzymatic reactive crystallization for improving ampicillin synthesis”, Chem. Eng. Sci. 2017, 165, 81-88; DOI 10.1016/j.ces.2017.02.040
6. MJ Mistilis, JC Joyce, ES Esser, I Skountzou, RW Compans, AS Bommarius, MR Prausnitz*, “Long-term stability of influenza vaccine in a dissolving microneedle patch”, Drug Deliv. and Transl. Res.2017, 7, 195-205; DOI 10.1007/s13346-016-0282-2
7. J.M. Oh, B. Sreedhar, M.E. Donaldson, T.C. Frank, A.K. Schultz, A.S. Bommarius, Y. Kawajiri, “Transesterification of propylene glycol methyl ether in chromatographic reactors using anion exchange resin as a catalyst”, J. Chromatography A 2016, 1466, 84-95; (DOI:10.1016/j.chroma.2016.08.072)
8. S. Tie, B. Sreedhar, G. Agrawal, J. Oh, M. Donaldson, T. Frank, A.S. Bommarius, Y. Kawajiri, “Model-Based Determination of Optimal Operation and Experimental Validation of Simulated Moving Bed Reactor for Production of Glycol Ether Ester”, Chem. Eng. J. 2016, 301, 188-199; doi: http://dx.doi.org/10.1016/j.cej.2016.04.062
9. L.G. Encarnación-Gómez, A.S. Bommarius, R.W. Rousseau, “Reactive crystallization of β-lactam antibiotics: Strategies to enhance productivity and purity of ampicillin”, Reaction Chemistry and Engineering 2016, 1, 321-9; DOI: 10.1039/C5RE00092K
10. L.G. Encarnación-Gómez, A.S. Bommarius, R.W. Rousseau, “Crystallization kinetics of ampicillin using online monitoring tools and robust parameter estimation”, Ind. Eng. Chem. Res. 2016, 55, 2153–2162; DOI: 10.1021/acs.iecr.5b03880
11. A. Sharma, K.L. Bruce, B. Chen, S. Jyoneva, S.H. Behrens, A.S. Bommarius*, Y.O. Chernoff*, “Contributions of the Prion Protein Sequence, Strain and Environment to the Species Barrier”, J. Biol. Chem. 2016, 291, 1277–1288; DOI 10.1074/jbc.M115.684100
12. M.J. Mistilis, J.C. Joyce, E.S. Esser, I. Skountzou, R.W. Compans, A.S. Bommarius, M.R. Prausnitz, “Long-term stability of influenza vaccine in a dissolving microneedle patch”, Drug Delivery and Translational Research 2016, 000 (in press); DOI 10.1007/s13346-016-0282-2
13. R.M. Clairmont, A.S. Bommarius, and A.L. Weber, “Synthesis of iNHC from a two-reaction network: an indirect approach to small molecule duplication”, J. Mol. Evol. 2015, 81, 1-9 (DOI 10.1007/s00239-015-9687-7)
14. K.S. Sarkisyan, A.S. Goryashchenko, P.V. Lidsky, D.A. Gorbachev, N.G. Bozhanova, A.Yu. Gorokhovatsky, A.R. Pereverzeva, A.P. Ryumina, V.V. Zherdeva, A.P. Savitsky, K.M. Solntsev, A.S. Bommarius, G.V. Sharonov, J.R. Lindquist, M. Drobizhev, T. Hughes, A. Rebane, K. Lukyanov, A. Mishin, "Green fluorescent protein with anionic tryptophan-based chromophore and long fluorescence lifetime", Biophysical Journal 2015, 109, 380-389 (http://dx.doi.org/10.1016/j.bpj.2015.06.018)
15. C.L. Walker, K.A. Lukyanov, I.V. Yampolsky, A.S. Mishin, A.S. Bommarius, A.M. Duraj-Thatte, B. Azizi, L.M. Tolbert, K.M. Solntsev, “Fluorescence imaging using synthetic GFP chromophores”, Curr. Opin. Chem. Biol. 2015, 27, 64–74
16. A.S. Bommarius, “Biocatalysis, a status report”, Annual Review of Chemical and Biomolecular Engineering 2015, 6, 319-345 (doi: 10.1146/annurev-chembioeng- 061114-123415)
17. R.B. Vegh, D.A. Bloch, A.S. Bommarius, M. Verkhovsky, S. Pletnev, H. Iwaï, A.V. Bochen-kova,* and K.M. Solntsev*, “Hidden Photoinduced Reactivity of the Blue Fluorescent Protein mKalama1”, Chem. Phys. Phys. Chem. 2015, 17, 12472 - 12485 (DOI: 10.1039/c5cp00887e)
18. J.T. Park, L.M. Gómez Ramos, A.S. Bommarius, “Engineering towards Nitroreductase Functionality in Ene-reductase Scaffolds”, ChemBioChem 2015, 16, 811-818 (doi: 10.1002/cbic.201402667)
19. M.J. Mistilis, A.S. Bommarius, M.P. Prausnitz, “Development of a thermostable microneedle patch for influenza vaccination”, J. Pharm. Sci., special issue commemorating Russ Middaugh, 2015, 104, 740-749 (DOI 10.1002/jps.24283)
20. L.G. Encarnación-Gómez, A.S. Bommarius, and R.W. Rousseau, “Reactive crystallization of enantiomers: Chemoenzymatic stereoinversion of chiral amino acids in saturated conditions”, Chem. Eng. Sci. 2015, 122, 416-425 (DOI: 10.1016/j.ces.2014.09.055)
21. J. Oh, G. Agrawal, B. Sreedhar, M.E. Donaldson, A.K. Schultz, T.C. Frank, A.S. Bommarius, Y. Kawajiri, “Conversion Improvement for Catalytic Synthesis of Propylene Glycol Methyl Ether Acetate by Reactive Chromatography: Experiments and Parameter Estimation”, Chem. Eng. J. 2015, 259, 397-409
22. Y. Kang, M. Sohn, J.L. Lee, M.J. Realff, A.S. Bommarius, „An effective chemical pretreatment method for lignocellulosic biomass with substituted imidazoles“, Biotechnol. Progr. 2015, 31, 25-34 (DOI: 10.1002/btpr.2005)
23. L.G. Encarnación-Gómez, A.S. Bommarius, and R.W. Rousseau, “Reactive crystallization of enantiomers: Chemoenzymatic stereoinversion of chiral amino acids in saturated conditions”, Chem. Eng. Sci. 2015, 122, 416-425 (DOI: 10.1016/j.ces.2014.09.055)
24. J. Oh, G. Agrawal, B. Sreedhar, M. E. Donaldson, A. K. Schultz, T. C. Frank, A. S. Bommarius, Y. Kawajiri, “Conversion Improvement for Catalytic Synthesis of Propylene Glycol Methyl Ether Acetate by Reactive Chromatography: Experiments and Parameter Estimation”, Chem. Eng. J. 2015, 259, 397-409
25. B.R. Bommarius, M. Schürmann, A.S. Bommarius, “A chimeric amine dehydrogenase offers surprising properties not found in either parent”, Chem. Commun. 2014, 50(95), 14953-55 (DOI: 10.1039/C4CC06527A)
26. S.K. Au, B. Bommarius, A.S. Bommarius, “Biphasic reaction system allows for conversion of hydrophobic substrates by amine dehydrogenases ”, ACS Catalysis 2014, 4, 4021-4026 (DOI 10.1021/cs4012167)
27. G. Agrawal, J. Oh, B. Sreedhar, S. Tie, M.E. Donaldson, T.C. Frank, A.K. Schultz, A.S. Bommarius, Y. Kawajiri, “Reactive simulated moving bed systems with modulation of feed concentration for production of glycol ether ester”, J. Chromatography A 2014, 1360, 196-208
28. A.S. Bommarius, M. Sohn, Y. Kang, J.H. Lee, M.J. Realff, "Protein engineering of cellulases", Current Opinion in Biotechnology, special issue "Cell and Pathway Engineering", eds.: Tina Lütke-Eversloh & Keith E. J. Tyo; 2014, 29, 139-145
29. R.B. Vegh, K.B. Bravaya , D.A. Bloch, A.S. Bommarius, L.M. Tolbert, M. Verkhovsky, A. I. Krylov, K.M. Solntsev, “Chromophore photoreduction in red fluorescent proteins is responsible for bleaching and phototoxicity”, J. Phys. Chem. B 2014, 118, 4527–34
30. A.L. Deaguero and A.S. Bommarius, “In Situ Mixed Donor Synthesis of Ampicillin with Ethylene Glycol Co-Solvent”, Biotechnol. Bioeng. 2014, 111, 1054-1058
31. J. Rubin, A. Sharma, L. Linden, A.S. Bommarius, S.H. Behrens, “Gauging Colloidal and Thermal Stability in human IgG1 – Sugar Solutions through Diffusivity Measurements”, J. Phys. Chem. B 2014, 118, 2803-2809
32. J. Rubin, L. Linden, W.M. Coco, A.S. Bommarius, S.H. Behrens, “Salt-Induced Aggregation of a Monoclonal Human Immunoglobulin G1”, J. Pharm. Sci. 2013, 102, 377-386
33. M.J. Abrahamson, J.W. Wong, A.S. Bommarius, “The rapid evolution of an amine dehydrogenase biocatalyst for the asymmetric production of chiral amines“ , Adv. Synth. Catal., 2013,355, 1780-1786
34. A.S. Bommarius and M.F. Paye, “Stabilizing biocatalysts”, Chemical Society Reviews 2013, 42 (15), 6534-6565 (Special Issue: Enzyme Immobilization), eds.: Ulf Hanefeld, Linqiu Cao
35. Y. Kang, P. Bansal, M.J. Realff, A.S. Bommarius, “SO2-Catalyzed Steam Explosion: The Effects of Different Severity on Digestibility, Accessibility and Crystallinity of Lignocellulosic Biomass”, Biotechnol. Progress 2013, 29, 909-916
36. J.K. Blum, W.D. Ricketts, and A.S. Bommarius, “Improved thermostability of amino ester hydrolase (AEH) by combining B-FIT analysis and structure-guided consensus method”, J. Biotechnol. 2012, 160, 214-221
37. M.J. Abrahamson, E. Vazquez-Figueroa, N.B. Woodall, J.C. Moore, A.S. Bommarius, “Development of a Novel Amine Dehydrogenase for Synthesis of Chiral Amines“, Angew. Chem. Intl. Ed. 2012, 51, 3969-3972
38. A.L. Deaguero, J.K. Blum, and A.S. Bommarius, “Improving the Diastereoselectivity of Penicil-lin G Acylase for Ampicillin Synthesis from Racemic Substrates”, Prot. Eng. Des. Select. 2012, 25, 135-144
39. P. Bansal, B.J. Vowell, M. Hall, M.J. Realff, J.H. Lee, A.S. Bommarius, “Elucidation of Cellulose Accessibility, Hydrolysability and Reactivity as the Major Limitations in the Enzymatic Hydrolysis of Cellulose”, Biores. Technol. 2012, 107, 243-250
40. H.S. Castillo, A.M. Ousley, A. Duraj-Thatte, K.N. Lindstrom, D.D. Patel, A.S. Bommarius, B. Azizi, “The Role of Residue C410 on Activation of the Human Vitamin D Receptor by Various Ligands”, J. Steroid Biochem. Mol. Biol. 2012, 128, 76-86
41. H. Shaffer, E. Chang, A. Bommarius, D. Doyle, B. Azizi, “BAPJ69-4A: A Yeast Two-Hybrid Strain for Both Positive and Negative Genetic Selection”, FEBS J., in press
42. M. Hall, J. Rubin, S.H. Behrens, and A.S. Bommarius, “The Cellulose-Binding Domain of Cellobiohydrolase Cel7A from Trichoderma reesei Is Also a Thermostabilizing Domain”, J. Biotechnol. 2011, 155, 370-376
43. M. Hall and A. S. Bommarius, "Enantioenriched compounds via enzyme-catalyzed redox reactions”, Chem. Rev. 2011, 111, 4088-4110
44. J.T. Park, J.I. Hirano, V. Thangavel, B.R. Riebel, A.S. Bommarius, “NAD(P)H oxidase V from Lactobacillus plantarum V (NoxV) displays enhanced operational stability even in absence of reducing agents”, J. Mol. Catal. B Enz. 2011, 71, 159-165
45. Y. Yanto, C. K. Winkler, S.J. Lohr, M. Hall, K. Faber, and A.S. Bommarius, “Asymmetric Bioreduction of Alkenes Using Ene Reductases YersER and KYE1, and Effects of Organic Solvents”, Org. Lett., 2011, 13, 2540-43
46. R.B. Vegh, K.M. Solntsev, M.K. Kuimova, S.H. Cho, Y.A. Liang, B.L.W. Loo, L.M. Tolbert, and A.S. Bommarius, “Reactive Oxygen Species in the Photochemistry of the Fluorescent Protein “Killer Red” “, Chem. Comm. 2011, 47, 4887-4889
47. A.S. Bommarius, J.K. Blum, and M.J. Abrahamson, “Status of Protein Engineering for Bio-catalysts: How to design an industrially useful biocatalyst”, Curr. Opin. Chem. Biol. 2011, 15, 194-200
48. M. Hall, P. Bansal, J.H. Lee, M.J. Realff, A.S. Bommarius, “Biological pretreatment of cellulose: Enhancing enzymatic hydrolysis rate using cellulose-binding domains from cellulases”, Biores. Technol. 2011, 102, 2910-15
49. ERRATUM: “Correlating aggregation kinetics and stationary diffusion in protein- sodium salt systems observed with dynamic light scattering”, J. Rubin, A. San Miguel, A.S. Bommarius, S.H. Behrens, J. Phys. Chem. B 2011, 115, 10778-78
50. M.R. Prausnitz and A.S. Bommarius, “Drug Design, Development, and Delivery: An Interdisciplinary Course on Pharmaceuticals”, J. Chem. Eng. Educ. 2011, 45, 47-52
51. J.K. Blum and A.S. Bommarius, “Amino Ester Hydrolase from Xanthomonas campestris pv. campestris, ATCC 33913 for Enzymatic Synthesis of Ampicillin”, J. Mol. Catal. B: Enzymatic 2010, 67, 21-28
52. J.K. Blum, A.L. Deaguero, C.V. Perez, and A.S. Bommarius, „"Ampicillin synthesis using a two-enzyme cascade with both alpha-Amino Ester Hydrolase and Penicillin G Acylase", ChemCatChem 2010, 2, 987-991
53. M. Hall, Y. Yanto, and A.S. Bommarius, ‘Old Yellow Enzyme’ family and Enoate Reductases: Asymmetric Reduction of C=C Bonds and Activity on Nitro Compounds, The Encyclopedia of Industrial Biotechnology: Bioprocess, Bioseparation, and Cell Technology (ed; M. Flickinger), Wiley, 2010, 2234-2247
54. A.L. Deaguero, J.K. Blum, A.S. Bommarius, Biocatalytic synthesis of beta-lactam antibiotics, The Encyclopedia of Industrial Biotechnology: Bioprocess, Bioseparation, and Cell Technology (ed; M. Flickinger), Wiley, 2010, 535-567
55. Y. Yanto, M. Hall, and A.S. Bommarius, Nitroreductase from Salmonella typhimurium: characterization and catalytic activity, Org. Biomol. Chem. 2010, 8, 1826-1832
56. J. Rubin, A. San Miguel, A.S. Bommarius, S.H. Behrens, Correlation of aggregation kinetics and stationary diffusion in protein - sodium salt systems observed with dynamic light scattering, J. Phys. Chem. B 2010, 114, 4383-4387
57. P. Bansal, M. Hall, M.J. Realff, J.H. Lee, and A.S. Bommarius, Multivariate statistical analysis of X-ray data from cellulose: A new method to determine degree of crystallinity and predict hydrolysis rates, Bioresource Technol. 2010, 101, 4461-4471
58. V. Yeh, J.M. Broering, B. Chen, A. Romanyuk, Y.O. Chernoff, A.S. Bommarius, The Hofmeister effect on Amyloid Formation Using Yeast Prion Protein, Protein Science 2010, 19, 47-56
59. T.A. Rogers and A.S. Bommarius, Utilizing Simple Biochemical Measurements to Predict Lifetime Output of Biocatalysts in Continuous Isothermal Processes, Chem. Eng. Sci. 2010, 65, 2118-2124
60. M. Hall, P. Bansal, J.H. Lee, M.J. Realff, and A.S. Bommarius, Cellulose Crystallinity: a Key Predictor of Enzymatic Hydrolysis Rate, FEBS J. 2010, 277, 1571-1582
61. P. Bansal, M. Hall, M. J. Realff, J. H. Lee, A. S. Bommarius. Modeling Cellulase Kinetics on Lignocellulosic Substrates. Biotechnol. Adv. 2009, 27, 833-848.
62. T. A. Rogers, R. M. Daniel, A. S. Bommarius, “Deactivation of TEM-1 b -lactamase investigated by isothermal batch and non-isothermal continuous enzyme membrane reactor methods”, ChemCatChem 2009, 1, 131-137.
63. B.L.W. Loo, A. Dubey, M.J. Realff, J.H. Lee, and A.S. Bommarius, “Analysis of recombinant sequences for interacting residues can improve the quality of combinatorial library: case study on fluorescent proteins”, Biotech. J. 2008, 3, 63-73
64. A.S. Bommarius, Adrian Katona, Sean E. Cheben, Arpit S. Patel, Arthur J. Ragauskas, Kristina Knudson, and Yunqiao Pu, “Cellulase kinetics as a function of cellulose pretreatment”, Metab. Eng. 2008, 10, 370-381
65. J.M. Broering and A.S. Bommarius, “A kinetic model for salt-induced protein deactivation”, J. Phys. Chem. B. 2008, 112, 12768–12775
66. N. Kothari, A.A. Jafarpour, R.P. Trebino, T.L. Thaler, A.S. Bommarius, “Astrobiological polarimeter”, Astrobiology 2008, 8, 1061-1069.
67. E. Vázquez-Figueroa, V. Yeh, J.M. Broering, J.F. Chaparro-Riggers, and A.S. Bommarius, “Thermostable Variants Constructed via the Structure-guided Consensus Method also Show Increased Stability in Salt Solutions and Homogeneous Aqueous-Organic Media”, Protein Eng. Des. Sel. 2008, 21, 673-680
68. J.F. Chaparro-Riggers, K.M. Polizzi, E. Vazquez-Figueroa, T.A. Rogers, and A.S. Bommarius, “Comparison of three Enoate Reductases and their potential use for biotransformations”, Adv. Synth. Catal. 2007, 349, 1521-1531
69. J.M. Broering and A.S. Bommarius, “Cation and strong cosolute effects on protein kinetic stability”, Biochem. Soc. Trans. 2007, 35, 1602-5.
70. E. Vazquez-Figueroa, J.F. Chaparro-Riggers, and A.S. Bommarius, “Development of a Thermostable Glucose Dehydrogenase via a Structure-guided Consensus Concept”, ChemBioChem 2007, 8, 2295-2301.
71. J.F. Chaparro-Riggers, B.L.W. Loo, K.M. Polizzi, P.R. Gibbs, X.-S. Tang, M.J. Nelson, and A.S. Bommarius, „Revealing Biases Inherent in Recombination Protocols“, BMC Biotechnology 2007, 7, 77
72. E.M. Hill, J.M. Broering, J.P. Hallett, C.L. Liotta, C.A. Eckert, and A.S. Bommarius, “Coupling Chiral Homogeneous Biocatalysis with Benign Heterogeneous Separation”, Green Chemistry 2007, 9, 888-893
73. K.M. Polizzi, D.A. Moore, and A.S. Bommarius, “A short-chain dehydrogenase/reductase from Vibrio vulnificus with both blue fluorescence and oxidoreductase activity”, Chem. Comm. 2007, 1843-5
74. K.M. Polizzi, A.S. Bommarius, J.M. Broering, J.F. Chaparro-Riggers, “Stability of enzymes”, Curr. Opin. Chem. Biol. 2007, 11, 220-225
75. J.F. Chaparro-Riggers, K.M. Polizzi, A.S. Bommarius, “Better library design: data-driven protein engineering”, Biotechnol. J. 2007, 2, 180-191
76. T.L. Thaler, P.R. Gibbs, R.P. Trebino, and A.S. Bommarius, “Search for Extraterrestrial Life Using Chiral Molecules: Mandelate Racemase as a Test Case”, Astrobiology 2006, 6, 910-920
77. A.S. Bommarius, J.M. Broering, J.F. Chaparro-Riggers and K.M. Polizzi, “High-Throughput Screening for enhanced stability of proteins” , Curr. Opin. Biotechnology 2006, 18, 606-610
78. A. Dubey, M.J. Realff, J.H. Lee, and A.S. Bommarius, “Identifying the Interacting Positions of a Protein using Boolean learning and Support Vector Machines”, Comp. Biol. Chem. 2006, 30, 268-279
79. G.T. Lountos, R. Jiang, W.B. Wellborn, T.L. Thaler, A.S. Bommarius and A.M. Orville, “The Crystal Structure of NAD(P)H Oxidase from Lactobacillus sanfranciscensis: Insights into the Conversion of O2 into Two Water Molecules by the Flavoenzyme“, Biochemistry 2006, 45, 9648-9659
80. K.M. Polizzi, M. Parikh, C.U. Spencer, I. Matsumura, J.H. Lee, M.J. Realff, and A.S. Bommarius, “Pooling for Improved Screening of Combinatorial Libraries for Directed Evolution” , Biotechnol. Progr. 2006, 22, 961-967
81. J.M. Broering, E.M. Hill, J.P. Hallett, C.L. Liotta, C.A. Eckert, and A.S. Bommarius, "Biocatalytic reaction and recycle using CO2-induced Organic Aqueous Tunable Solvents (OATS)", Angew. Chem. Intl. Ed. 2006, 45, 4670-4673
82. K.M. Polizzi&, J.F. Chaparro-Riggers&, E. Vazquez-Figueroa, and A.S. Bommarius, “Structure-guided consensus approach to create a more thermostable penicillin G acylase”, Biotechnology J. 2006, 1, 531-536
83. A.S. Bommarius and K.M. Polizzi, “Novel biocatalysts: recent developments”, Chem. Eng. Sci. 2006, 61, 1004-1016
84. K.M. Polizzi, C.U. Spencer, A. Dubey, I. Matsumura, J.H. Lee, M.J. Realff, and A.S. Bommarius, “Simulation modeling of pooling for combinatorial protein engineering”, J. Biomol. Screening, 2005, 10, 856-864
85. A.S. Bommarius and A. Karau, “Deactivation of formate dehydrogenase (FDH) in solution and at gas-liquid interfaces”, Biotechnol. Progr. 2005, 21, 1663-1672
86. J.M. Broering and A.S. Bommarius, „Evaluation of Hofmeister effects on the kinetic stability of proteins“, J. Phys. Chem. B 2005, 109, 20612-19
87. A.S. Bommarius and J.M. Broering, ““Established and novel tools to investigate biocatalyst stability”, Biocatalysis and Biotransformation 2005, 23, 125-139
88. R. Jiang, B.R. Riebel and A.S. Bommarius, “Comparison of competing oxygen reduction pathways in Lactococcus lactis: four-electron vs. two-electron reduction by NADH oxidases”, Adv. Synth. Cat. 2005, 347, 1139-1146
89. P.R. Gibbs, C.S. Uehara, U. Neunert, and A.S. Bommarius, “Accelerated biocatalyst stability testing for process optimization”, Biotech. Progr. 2005, 21, 762-774
90. A. Dubey, M.J. Realff, J.H. Lee, and A.S. Bommarius, “Support Vector Machines for Predicting the Critical Positions of a Protein”, J. Theor. Biol. 2005, 234, 351-361
91. G.T. Lountos, B.R. Riebel, W.B. Wellborn, A.S. Bommarius, A.M. Orville, "Crystallization and Preliminary Analysis of a Water-Forming NADH Oxidase from Lactobacillus sanfranciscensis", Acta Cryst. D, 2004, 60, 2044-47
92. R. Jiang and A.S. Bommarius, "Hydrogen peroxide-producing NADH oxidase (nox 1) from Lactococcus lactis", Tetrah. Asymm. 2004, 15, 2939-44
93. P. Ödman, W.B. Wellborn, A.S. Bommarius, "An enzymatic process to -ketoglutarate from L-glutamate: the coupled system L-glutamate dehydrogenase/NADH oxidase", Tetrah. Asymm. 2004, 15, 2933-37
94. J. Lu, M.J. Lazzaroni, J.P. Hallett, A.S. Bommarius, C.L. Liotta, and C.A. Eckert, "Tunable Solutions for Homogeneous Catalyst Recycle", I&EC Research 2004, 43, 1586-1590
95. B.R. Riebel, P.R. Gibbs, W.B. Wellborn, and A.S. Bommarius, "Cofactor regeneration of both NAD+ from NADH and NADP+ from NADPH: NADH oxidase from Lactobacillus sanfranciscensis", Adv. Synth. Cat., 2003, 345, 707-712
96. B.R. Riebel, P.R. Gibbs, W.B. Wellborn, and A.S. Bommarius, "Cofactor regeneration of NAD+ from NADH: novel water-forming NADH oxidases", Adv. Synth. Cat., 2002, 344, 1156-1169
97. O. May, S. Verseck, A.S. Bommarius, and K. Drauz, "Development of Dynamic Kinetic Resolution Processes for Biocatalytic Production of Natural and Nonnatural L-Amino Acids", Organic Process Research & Development. 2002, 6, 452-457
98. J. Wöltinger, K. Drauz and A. S. Bommarius, "The Membrane Reactor in the Fine Chemicals Industry", Appl. Catalysis A: General. 2001, 221, 171–185
99. S. Verseck, A.S. Bommarius and M.-R. Kula, "Screening, Overexpression and Characterization of an N-Acylamino Acid Racemase from Amycolatopsis orientalis subsp. lurida", Appl. Microbiol. Biotechnol. 2001, 55, 354-361
100. A.S. Bommarius, M. Schwarm and K. Drauz, "Comparison of Different Chemoenzymatic Process Routes to Enantiomerically Pure Amino Acids", Chimia 2001, 55, 50-59
101. J. Wöltinger, H. Henniges, A.S. Bommarius, H.-P. Krimmer and K. Drauz, "Application of the continuous Sharpless-dihydroxylation", Tetrahedron Asymmetry 2001, 12, 2095-2098
102. J. Wöltinger, A.S. Bommarius, K. Drauz and C. Wandrey, "The Chemzyme Membrane Reactor in the Fine Chemicals Industry", Organic Process Research & Development, 2001, 5, 241-248
103. A.S. Bommarius, K. Drauz, S. Eils, J. Kirchhoff and M. Schwarm, "Reduction Technologies in the Industrial Synthesis of Fine Chemicals", Chimica Oggi 2000, 18, 12-17
104. A.S. Bommarius, M. Schwarm and K. Drauz, "Biocatalysis to Amino Acid-based Chiral Pharmaceuticals - Examples and Perspectives", J. Mol. Cat B: Enzymatic 1998, 5, 1-11
105. U. Eichhorn, A.S. Bommarius, K. Drauz and H.-D. Jakubke, "Synthesis of dipeptides by suspension-to-suspension conversion via thermolysin catalysis - from analytical to preparative scale", J. Peptide Science 1997, 3, 245-251
106. G. Krix, A.S. Bommarius, K. Drauz, M. Kottenhahn, M. Schwarm and M.-R. Kula, "Enzymatic reduction of a-keto acids leading to L-amino acids or D-hydroxy Acids", J. Biotechnology 1997, 53, 29-39;
107. A.S. Bommarius, K. Drauz, K. Günther, G. Knaup and M. Schwarm, "L-Methionine Related L-Amino Acids by Acylase Cleavage of Their Corresponding N-Acetyl-DL-Derivatives", Tetrahedron Asymmetry 1997, 8, 3197-3200
108. U. Stelkes-Ritter, G. Beckers, A.S. Bommarius, K. Drauz, K. Günther, M. Kottenhahn, M. Schwarm and M.-R. Kula, "Kinetics of peptide amidase and its application for the resolution of racemates", Biocatalysis and Biotransformations 1997, 15, 205-219
109. A.S. Bommarius, M. Schwarm and K. Drauz, "The membrane reactor for the acylase process - from laboratory results to commercial scale", Chimica Oggi 1996, 14(10), 61-64;
110. A.S. Bommarius, D.I.C. Wang and T.A. Hatton, "Xanthine Oxidase Reactivity in Reversed Micellar Systems: A Contribution to the Prediction of Enzymatic Activity in Organized Media", J. Amer. Chem. Soc. 1995, 117, 4515-4523;
111. U. Joeres, A.S. Bommarius, J. Thömmes & M.-R. Kula, "Studies on the kinetics and application of L-carnitine amidase for production of L-carnitine", Biocatalysis & Biotransformation 1995, 12, 27-36;
112. U. Eichhorn, A.S. Bommarius, K. Drauz and H.-D. Jakubke, "Environmentally acceptable synthesis of peptides in high yields by suspension-to-suspension conversion via protease catalysis", PEPTIDES 1994, (Hrsg.: H.L.S. Maia), Escom, Leiden, 1995, 226-7;
113. T.A. Hatton and A.S. Bommarius, "A population balance analysis of substrate distribution effects on enzymatic reaction rates in reversed micelles", Proceedings of the Material Research Society 1995, 366, 439-444;
114. A.S. Bommarius, M. Schwarm, K. Stingl, M. Kottenhahn, K. Huthmacher and K. Drauz, "Synthesis and Use of Enantiomerically Pure tert.-Leucine", Tetrahedron Asymmetry 1995, 6, 2851-2888;
115. A. Fischer, A.S. Bommarius, K. Drauz and C. Wandrey, "A novel approach to enzymatic peptide synthesis using highly solubilizing Na-protecting groups of amino acids", Biocatalysis 1994, 8, 289-307;
116. A.S. Bommarius, K. Drauz, W. Hummel, M.-R. Kula and C. Wandrey, "Some new developments in reductive amination with cofactor regeneration", Biocatalysis 1994, 10, 37-47;
117. A.S. Bommarius and K. Drauz, "An Enzymatic Route to L-Ornithine from Arginine - Activation, Selectivity and Stabilization of L-Arginase", Bioorganic and Medicinal Chemistry 1994, 2, 617-626;
118. C. Petit, A.S. Bommarius, M.-P. Pileni and T.A. Hatton, "Characterization of a Four-Component Cationic Reversed Micellar System: DTAC/Hexanol/n-Heptane/0.1 M KCl Solution", J. Phys.Chem. 1992, 96, 4653-58;
119. A.S. Bommarius, K. Drauz, H. Klenk und C. Wandrey, "Operational Stability of Enzymes - Acylase-Catalyzed Resolution of N-Acetyl Amino Acids to Enantiomerically Pure L-Amino Acids", Annals N.Y. Acad. Sci. (Enzyme Eng. XI) 1992, 672, 126-36;
120. A.S. Bommarius, M. Kottenhahn, H. Klenk and K. Drauz, "A versatile direct route from hydantoins to D-amino acids employing a resting cell biocatalyst with D-hydantoinase and D-carbamoylase activity", in: "Microbial Reagents in Organic Synthesis", ed.: S. Servi, Kluwer Acad. Publ., Dordrecht, London, Boston, NATO ASI Series 1992, C 381, 161-174;
121. E.B. Leodidis, A.S. Bommarius and T.A. Hatton, "Amino Acids in Reversed Micelles: Dependence of the Interfacial Partition Coefficient on Excess Phase Salinity and Interfacial Curvature", J. Phys. Chem. 1991, 95, 5943-56;
122. A.S. Bommarius, K. Makryaleas & K. Drauz, "An Enzymatic Route to L-Ornithine from L-Arginine; Activation and Stabilization Studies on L-Arginase", Biomed. Biochim. Acta 1991, 50, 249-55
123. A. Fischer, A. Schwarz, C. Wandrey, A.S. Bommarius, G. Knaup and K. Drauz, "Preparative-scale enzyme-catalyzed peptide synthesis using solubilizing N-terminal protecting groups", Biomed. Biochim. Acta 1991, 50, 169-74
124. A.S. Bommarius, J.F. Holzwarth, D.I.C. Wang & T.A. Hatton, "Coalescence and Solubilizate Exchange in a Cationic Four Component Reversed Micellar System", J. Phys. Chem. 1990, 94, 7232-39
125. A.S. Bommarius, J.F. Holzwarth, D.I.C. Wang and T.A. Hatton, "A Population Balance Model for the Determination of Solubilizate Exchange Rate Constants in Reversed Micellar Systems", in: "Structure, Dynamics, and Equilibrium Properties in Colloidal Systems", NATO ASI Series C 1990, 324, 181-99, eds.: H.B. Bloor & E. Wyn-Jones, Kluwer Acad. Publ., Dordrecht, London, Boston
126. J.W. Shield, H.D. Ferguson, A.S. Bommarius and T.A. Hatton, "Enzymes in Reversed Micelles as Catalysts for Organic-Phase Reactions"; Ind. Eng. Chem. Fundam. 1986, 25, 603-612